One Month International Bioinformatics Workshop on - Microbial Genomics (2nd Ed.) by Decode Life

Registration is open for one month Bioinformatics Workshop by DE<code>LIFE

Duration: 11 January - 2 February, 2025

Registration Link - https://decodelife.co.in

Fees: Rupees 1300 for Indian Participants /USD 30 for International Participants

Schedule

Date	Day	Topic
11 Jan, 2025	Saturday	Introduction to Command Line
12 Jan, 2025	Sunday	Advance Linux/Unix Commands
13 Jan, 2025	Monday	Package Manager - Conda Environment
14 Jan, 2025	Tuesday	R Programming Basics
15 Jan, 2025	Wednesday	R Programming Basics
16 Jan, 2025	Thursday	R Programming Basics
17 Jan, 2025	Friday	Introductory NGS ,File formats and Quality Control
18 Jan, 2025	Saturday	Metagenomics Resources :MGnify: Tools for analyzing and visualizing metagenomics datasets. MG-RAST (Metagenomics Rapid Annotations). CAMERA: Metagenomics data and microbial ecology tools. HMP (Human Microbiome Project): Genomic data from human microbiomes.
19 Jan, 2025	Sunday	Metagenomics Resources :MGnify: Tools for analyzing and visualizing metagenomics datasets. MG-RAST (Metagenomics Rapid Annotations). CAMERA: Metagenomics data and microbial ecology tools. HMP (Human Microbiome Project): Genomic data from human microbiomes.
20 Jan, 2025	Monday	Microbial Genomic Databases : NCBI, KEGG, GTDB (Genome Taxonomy Database), SILVA, EzBioCloud, RDP (Ribosomal Database Project)
		Qiime Gene based amplicon sequencing : a) Clustering of sequences b) Phylogenetic Diversity Analysis
21 Jan, 2025	Tuesday	Preprocessing and Clustering 1. Introduction to QIIME2 2. Preprocessing and Quality Control 3. Sequence Clustering: DADA2 Workflow
22 Jan, 2025	Wednesday	Phylogenetic Diversity Analysis
23 Jan, 2025	Thursday	Phylogenetic Diversity and Taxonomic Analysis
24 Jan, 2025	Friday	Comparative genomics: Pangenome Analysis
25 Jan, 2025	Saturday	Metatranscriptome analysis
26 Jan, 2025	Sunday	Metatranscriptome analysis
27 Jan, 2025	Monday	off
28 Jan, 2025	Tuesday	Shotgun metagenome Sequencing, Taxonomic and Functional Analysis
29 Jan, 2025	Wednesday	Shotgun metagenome Sequencing, Taxonomic and Functional Analysis
30 Jan, 2025	Thursday	Whole Genome Assembly
31 Jan, 2025	Friday	off
1 Feb, 2025	Saturday	Genome assembly statistics, quality assessment and gene prediction
2 Feb, 2025	Sunday	Bacterial species identification, sequence typing and serotyping